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Cagan Lab - Protocols

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Antibody staining for light microscopy

  1. High quality:

  2. 1.Fix tissue in PLP or PEM for 30’.

  3. 2.Wash 1x10’ in PBS; then 2x10’ in 0.1% saponin/PBS
    Never use Na Azide. Can use 0.01% thimerosol

  4. 3.1° Ab + 10% goat serum in 0.1% saponin overnight

  5. 4.Wash 3 x 10’ in saponin

  6. 5.If using (eg) HRP-conj 2° Ab:
    1.  2° Ab + 10% goat serum in 0.1% saponin 1-2 hrs.
    If using vectastain:
    1.  2° biotin-Ab + 10% serum in saponin 1-2 hr
    2.  Wash 3x10’ in saponin
    3.  “A” (1:100) + “B” (1:100)  + 10% serum in saponin 1-2 hr

  7. 6.Wash 2x10’ in saponin, then 2x10’ in PBS.
    Wash tissue thoroughly before refixing

  8. 7.Fix 15’ in 2% glutaraldehyde/PBS; wash 3 x 10’ in PBS

  9. 8.Develop with 0.5 mg/ml DAB in PBS
    Can add 5µl of 8% NiCl2 solution to 1 ml DAB to enhance contrast
    Stop reaction by transferring discs to PBS with 0.01% Na Azide

  10. 9.Wash 2x10’ in PBS; mount in Aquamount


  1. High penetration:

  2. 1.Fix tissue in 4% paraformaldehyde for 20 min.

  3. 2.Wash 1x10’ in PBS; then 2x10’ in 0.3% Triton-X100/PBS
    Never use Na Azide. Can use 0.01% thimerosol
    Note that Triton-X100 is the same as NP40

  4. 3.1° Ab + 10% goat serum in 0.3% Triton-X100 for  2 hrs-overnight; shaking

  5. 4.Wash 2x 10’ in Triton-X100

  6. 5.2° Ab + 10% goat serum in 0.3% Triton-X100 2 hrs; shaking

  7. 6.Wash 2x10’ in 0.3% Triton-X100, then 2x10’ in PBS.
    Wash tissue thoroughly before refixing

  8. 7.Fix 5’-10’ in 2% glutaraldehyde/PBS

  9. 8.Develop with 0.5 mg/ml DAB in PBS
    Can add 5µl of 8% NiCl2 solution to 1 ml DAB to enhance contrast
    Stop reaction by transferring discs to PBS with 0.01% Na Azide

  10. 9.Wash 2x10’ in PBS; mount in Aquamount